PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GRMZM2G139740_P01
Common NameEREB32, ZEAMMB73_106058
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
Family ERF
Protein Properties Length: 193aa    MW: 20659.8 Da    PI: 4.758
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GRMZM2G139740_P01genomeMaizeSequenceView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.51.6e-182475156
                AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
                       ++y+GVr++k +g+Wv+eIr p   g + r++lg+f++ae Aa a++ a+++++g+
  GRMZM2G139740_P01 24 PQYRGVRRRK-WGKWVSEIRQP---GTKVRVWLGSFDSAEAAAVAHDVAALCMRGP 75
                       68*****998.**********8...325**************************95 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008471.8E-122474IPR001471AP2/ERF domain
CDDcd000181.02E-172483No hitNo description
SMARTSM003801.5E-352589IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.105.7E-302584IPR001471AP2/ERF domain
PROSITE profilePS5103222.8792583IPR001471AP2/ERF domain
SuperFamilySSF541711.05E-192584IPR016177DNA-binding domain
PRINTSPR003678.3E-102637IPR001471AP2/ERF domain
PRINTSPR003678.3E-104864IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 193 aa     Download sequence    Send to blast
MENHQLQQQQ QQPAAPVAAA ASSPQYRGVR RRKWGKWVSE IRQPGTKVRV WLGSFDSAEA  60
AAVAHDVAAL CMRGPRDAQL NFPGSAGWLP RPASTDPADI RAAAAEAAER VRREPALVGT  120
DAAAEPGRGP ASASRLDLAV GDEFDDDLES PRLWTEMAEA MLLDPPKWGP DGSDGSEGSG  180
SQNWPHGSLW DAC
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A2e-152183163ATERF1
3gcc_A2e-152183163ATERF1
Search in ModeBase
Expression -- Microarray ? help Back to Top
Source ID
Expression AtlasGRMZM2G139740
Cis-element ? help Back to Top
SourceLink
PlantRegMapGRMZM2G139740_P01
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008680453.11e-136PREDICTED: ethylene-responsive transcription factor ERF024-like
SwissprotQ391272e-30TINY_ARATH; Ethylene-responsive transcription factor TINY
TrEMBLK7U5671e-136K7U567_MAIZE; Putative AP2/EREBP transcription factor superfamily protein
STRINGGRMZM2G139740_P011e-135(Zea mays)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP22443389
Representative plantOGRP6161718
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G71450.12e-21ERF family protein